Dr Huseyin Seker
P u b l i c a t i o n s
2016
A.B. Orun, Huseyin Seker, J.L. Rose, A. Moemeni
and M. Fidan, “A quantisation of cognitive learning
process by computer graphics-games: towards more efficient learning models”, Open Access
Library Journal, 3:e2329, January 2016. http://dx.doi.org/10.4236/oalib.1102329
F. Sarac and H. Seker, “An
Instance Selection Framework for Mining Data Streams to Predict
Antibody-Feature Function Relationships on RV144 HIV Vaccine Recipients”, IEEE
SMC 2016, Budapest, Hungary, 9-12 October 2016.
F. Sarac, V. Uslan, H. Seker and A. Bouridane, “A Supervised Feature Selection Framework in
relation to Prediction of Antibody Feature-Function Activity Relationships in
RV144 Vaccines”, IEEE SMC 2016, Budapest, Hungary, 9-12 October 2016.
M. Abdalla, H. Seker and R. Jiang, “Identification of
Rabbit Coccidia by Using Microscopic Images”, ICEMIS 2016, Agadir, Morocco, 22-24 September, 2016.
V. Uslan and H. Seker, “Binding
Affinity Prediction of S. Cerevisiae 14-3-3 and GYF Peptide-Recognition Domains
Using Support Vector Regression”, IEEE EMBC 2016, Florida, USA, 16-20 August 2016.
C. Chrysostomou
and H. Seker, “Structural Classification of
Protein Sequences based on Signal Processing and Support Vector Machines”, IEEE EMBC 2016, Florida, USA, 16-20
August 2016.
F. Sarac, V. Uslan, H. Seker and A. Bouridane, “Unsupervised
Selection of RV144 HIV Vaccine-Induced Antibody Features Correlated to Natural
Killer Cell-Mediated Cytotoxic Reactions”, IEEE EMBC 2016, Florida, USA, 16-20 August 2016.
A. Dreder,
M.A. Tahir, H. Seker
and M.N. Anwar, “Majority Voting Approach for the Identification of
Differentially Expressed Genes to Understand Gender-Related Skeletal Muscle
Aging”, The Sixth International Conference on
Computer Science, Engineering and Information Technology (CCSEIT 2016) Vienna,
Austria, May 21-22, 2016, (Volume Editors : Jan Zizka,
Dhinaharan Nagamalai; ISBN
: 978-1-921987-51-9)
O. Ozdemir, E. Yucesan,
F.Y. Kesim, O. Akman, S. Ugur, O. Huseyinbas, H. Seker and
U. Ozbek, “Genome-wide analysis of epileptogenesis on febrile seizure rat model”, 10. Ulusal Epilepsi Kongresi (10th National Epilepsy Congress),
12-15 May 2016, Seferihisar, Izmir, Turkey;
(Abstract; S-7; p:50),
Omer Faruk Ogutcen, Zeliha Gormez, Muhammad Tahir and Huseyin Seker, “An Aggregated Cross-Validation Framework for Computational Discovery of Disease-Associative Genes”, MEDICON 2016 (31 March - 2 April 2016, Paphos, Cyprus)
Huseyin Seker, “Deep analysis of microscopic parasite images: Towards automating the detection of the parasites in farm animals”, (Invited Speech), 2016 International Conference on Image, Vision and Computing (ICIVC 2016) (August 3-5, 2016, Portsmouth, UK)
Huseyin Seker, “Making an impact with big data in the digital age: Challenges and Opportunities”, (Invited Speech), ICCIT 2016 (11-12 April 2016, Istanbul, Turkey)
Huseyin Seker, “Making the technology work for productive clinical practices in the big data era”, (Invited Speech), The 6th International Performance and Quality in Health Care Congress (01-04 March 2016, Antalya, Turkey)
2015
Arinze Akutekwe, Huseyin Seker and S. Yang, “In
Silico Discovery of Significant Pathways in Colorectal Cancer Metastasis Using
a Two-Stage Optimization Approach”, (Accepted)
IET Systems Biology, July 2015
Mohamed A. E. Abdalla, Huseyin Seker and Richard Jiang, “Automated Identification of Chicken Eimeria
Species from Microscopic Images”, IEEE BIBE 2015 (2-4 November 2015, Belgrade,
Serbia)
Ferdi Sarac, Volkan Uslan, Huseyin Seker and
Ahmed Bouridane, “Exploration of Unsupervised Feature
Selection Methods in relation to the Prediction of Cytokine Release Effect
correlated to Antibody Features in RV144 Vaccines”, IEEE BIBE 2015 (2-4 November 2015, Belgrade, Serbia)
Arinze
Akutekwe and Huseyin Seker, “Inferring the Dynamics of Gene Regulatory Networks
via Optimized Recurrent Neural Network and Dynamic Bayesian Network”, IEEE
CIBCB 2015 (12-15 August 2015, Niagara Falls, Canada)
Charalambos Chrysostomou and Huseyin Seker,
“Novel Protein Weight Matrix generated from Amino Acid Indices”, IEEE EMBC 2015
(25-29 August 2015, Milan, Italy)
Arinze
Akutekwe and Huseyin Seker, “Inference of Nonlinear Gene Regulatory Networks
through Optimized Ensemble of Support Vector Regression and Dynamic
Bayesian Networks”, IEEE EMBC 2015 (25-29 August 2015, Milan, Italy)
Ferdi
Sarac, Volkan Uslan, Huseyin Seker and
Ahmed Bouridane, “Comparison of Unsupervised Feature
Selection Methods for High-Dimensional Regression Problems in Prediction of
Peptide Binding Affinity”, IEEE EMBC 2015 (25-29 August 2015, Milan,
Italy)
Naser
Alfed, Fouad Khelifi, Ahmed
Bouridane and Huseyin Seker, “Pigment network-based skin
cancer detection”, IEEE EMBC 2015 (25-29 August 2015, Milan, Italy)
Volkan
Uslan and Huseyin Seker, “The quantitative prediction of HLA-B*2705
peptide binding affinities using Support Vector Regression to gain
insights into its role for the Spondyloarthropathies”, IEEE EMBC 2015
(25-29 August 2015, Milan, Italy)
Hanaa Hussain, Khaled Benkrid
and Huseyin Seker,
“Dynamic Partial Reconfiguration implementation of the
SVM/KNN multi-classifier on FPGA for Bioinformatics
application”, IEEE EMBC 2015 (25-29 August 2015, Milan, Italy)
Huseyin Seker, (Keynote Speech), “Bio-Health
Informatics in the Post-Genomic Era: Challenges in Bringing Self-Growing Bio-Health
Data to its Knees”,
2015 International Conference on Computer and Information Technology (ICCIT
2015), 28-29 April 2015, Ankara, Turkey
2014
H. Hussain, K. Benkrid, and H.
Seker, “Novel dynamic partial reconfiguration
implementations of the support vector machines classifier on FPGA”, (Accepted) T. Journal of Electrical Engineering and Computer Science,
September 2014. (DOI: 10.3906/elk-1402-18)
A.B. Orun, E. Goodyer, H. Seker,
G. Smith, V. Uslan and D. Chauhan,
"Optimized parametric skin
modelling for diagnosis of skin abnormalities by combining light
back-scatter and laser speckle imaging", Skin Research and Technology journal, Vol.20(4), pp: 473-485,
November 2014. (DOI:10.1111/srt.12142)
C.O. Sakar, O. Kursun, H. Seker, F. Gurgen, N. Aydin, and O. Favorov, "Combining
Multiple Views: Case Studies on Protein and Arrhythmia Features", Engineering Applications of Artificial
Intelligence journal, Vol. 28, pp: 174-180, February 2014 (DOI:10.1016/j.engappai.2013.11.004)
C.O. Sakar, O. Kursun, H. Seker and F. Gurgen,
"Combining Multiple Clusterings for Protein
Structure Prediction", International
Journal of Data Mining and Bioinformatics, Vol.10(2),
pp: 162-174, 2014 (DOI: 10.1504/IJDMB.2014.064012)
Rainer Merkl,
Ali Kilinc, Senck Selcuki and Huseyin Seker, Editors, Proceedings of the
International Conference on Applied Informatics for Health and Life Sciences,
October 2014
A. Akutekwe and H. Seker, “Particle swarm optimization-based bio-network discovery method for the diagnosis of colorectal cancer”, Proc. of the Workshop on Computational Intelligence for Biomedicine and Bioinformatics as part of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2-5 November 2014, Belfast, UK
A. Akutekwe,
S. Iliya and H.
Seker, “An Optimized Hybrid Dynamic Bayesian
Network Approach using Differential Evolution Algorithm for the Diagnosis of
Hepatocellular Carcinoma”, Proc. of the 6th IEEE International Conference On Adaptive
Science & Technology (IEEE ICAST 2014), 29-31 October 2014, Ota (Near
Lagos), Nigeria.
Serpil Ustebay, Ahmet Orun, Huseyin Seker and Ahmet Sertbas,
“Investigating the amigdala-thread effects on
cognitive learning via graphical domains and Bayesian networks”, Proceeding of the International
Conference on Applied Informatics for Health and Life Sciences in conjunction
with the Turkish-German Workshop on Bioinformatics: Recent Developments from
Health to Nanotechnology, 19-22 October 2014, Kusadasi,
Turkey
Martin Mueller-Holtz,
Huseyin Seker and Geoff
Smith, "Measurement
of Refractive Index using Terahertz Reflectance Mode on Fixed Quartz Sample
Holder”, Proceeding of the International Conference on Applied Informatics for
Health and Life Sciences in conjunction with the Turkish-German Workshop on
Bioinformatics: Recent Developments from Health to Nanotechnology, 19-22
October 2014, Kusadasi, Turkey
A. Akutekwe and H. Seker, “Two-Stage Bioinformatics Approach for the
Diagnosis of Hepatocellular Carcinoma and Discovery of its Bio-Network”,
(Accepted) Proceeding of the International Conference on Applied Informatics for
Health and Life Sciences in conjunction with the Turkish-German Workshop on
Bioinformatics: Recent Developments from Health to Nanotechnology, 19-22
October 2014, Kusadasi, Turkey
M.
Mueller-Holtz, H. Seker
and G. Smith, "Wavelet de-noising and reconstruction of a micro-needle embedded in
human skin ex-vivo using terahertz pulsed reflectance mode", Proc. of the IEEE EMBC 2014, 27-31 August 2014,
Chicago, USA.
H. Seker, V. Uslan, A.B. Orun, E. Goodyer and G. Smith, "Prediction of skin
ages by means of multi-spectral light sources", Proc. of the IEEE EMBC
2014, 27-31 August 2014, Chicago, USA
C. Chrysostomou
and H. Seker,
"Construction of protein dendrograms based on amino acid indices and
discrete Fourier transform", Proc. of the IEEE EMBC 2014, 27-31 August
2014, Chicago, USA
C. Chrysostomou
and H. Seker,
"Prediction of protein allergenicity based on signal-processing
bioinformatics approach", Proc. of the IEEE EMBC 2014, 27-31 August 2014,
Chicago, USA
A.
Akutekwe and H.
Seker, "A hybrid dynamic Bayesian network approach for modelling temporal
associations of gene expressions for hypertension diagnosis", Proc.
of the IEEE EMBC 2014, 27-31 August 2014, Chicago, USA
Y. Kocyigit
and H. Seker,
"Hybrid imbalanced data classifier models for computational discovery of
antibiotic drug targets", Proc. of the IEEE EMBC 2014, 27-31 August 2014,
Chicago, USA.
V. Uslan, H. Seker and
R.I. John, “A Support Vector-Based Interval Type-2 Fuzzy System”, FUZZ-IEEE
2014 (a part of IEEE WCCI 2014), Beijing, China, 6-11 July 2014.
A. Akutekwe
and H. Seker,
“Two-Stage Computational Bio-Network Discovery Approach for Metabolites:
Ovarian Cancer as a Case Study”, IEEE-EMBS International Conferences on
Biomedical and Health Informatics of the IEEE Engineering in Medicine and
Biology Society, Valencia, Spain, 1-4 June 2014.
A.B. Orun, H. Seker, E.
Goodyer, G. Smith and V. Uslan, “An improvement of
skin aging assessment by non-invasive laser speckle effect: A comparative
texture analysis”, IEEE-EMBS International Conferences on Biomedical and Health
Informatics of the IEEE Engineering in Medicine and Biology Society, Valencia,
Spain, 1-4 June 2014.
2013
A. Celebiler, H. Seker, B. Yuksel, A. Orun, S. Bilgili and M.B. Karaca, "Discovery of connection between Age Related Macular Degeneration, MTHFR C677T and PAI 1 4G/5G gene polymorphisms and body mass index by means of Bayesian inference methods", T. Journal of Electrical Engineering and Computer Science, Vol.21, pp: 2062-2078, 2013. (DOI:10.3906/elk-1111-21)
C.J. Carmona, C. Chrysostomou, H. Seker and
M. J. del Jesus, "Fuzzy Rules for Describing Subgroups from Influenza A Virus
Using a Multi-Objective Evolutionary Algorithm", Applied Soft Computing, Vol:13(8), pp: 3439-3448, August 2013.
N. Norbert and H. Seker, "HIV Progression to AIDS:
Bioinformatics Approach to Determining the Mechanism of Action", Current HIV Research journal, Vol.
11(1), pp: 30-42, 2013. (PMID:22998236)
Huseyin Seker and Graham
Ball, Editors, Proceedings of the International Conference
on Applied Informatics for Health and Life Sciences, September 2013.
V. Uslan
and H. Seker,
"Support vector-based fuzzy system for the prediction of mouse class I MHC
peptide binding affinity", Proc. of the 13th IEEE International Conference
on BioInformatics and BioEngineering
(IEEE BIBE2013), Chania, Crete, Greece, 10-13 November 2013.
V. Uslan
and H. Seker,
"Relational Fuzzy Clustering to Reveal Multifunctional Proteins
in a Protein-Protein Interaction Network",
Proc. of the International Conference on Applied Informatics for Health and
Life Sciences, 9-11 September 2013, Istanbul, Turkey, pp: 25-28
H. M. Hussain, K. Bendrid and H.
Seker, "Role of FPGAs as High Performance Computing Solution to
Bioinformatics and Computational Biology Data",
Proc. of the International Conference on Applied Informatics for Health and
Life Sciences, 9-11 September 2013, Istanbul, Turkey, pp: 102-105
M. Quessou,
I. Karacan and H.
Seker "Mobile Device/Smart Phone Application for the Estimation of
Warfarin Dosing", Proc. of the International
Conference on Applied Informatics for Health and Life Sciences, 9-11 September
2013, Istanbul, Turkey, pp: 110-111.
V. Uslan,
and H. Seker,
"Support Vector-Based Takagi-Sugeno Fuzzy System
for the Prediction of Binding Affinity of Peptides", Proc. of the IEEE
EMBC 2013, 3-7 July 2013, Osaka, Japan.
(PMID: 24110624)
C. Chrysostomou,
and H. Seker,
"Signal-processing based bioinformatics approach for the identification of
influenza A virus subtypes in Neuraminidase genes", Proc. of the IEEE EMBC
2013, 3-7 July 2013, Osaka, Japan. (PMID: 24110375)
C. Chrysostomou,
and H. Seker,
"Construction of Protein Distance Matrix Based on Amino Acid Indices and
Discrete Fourier Transform", Proc. of the IEEE EMBC 2013, 3-7 July 2013,
Osaka, Japan. (PMID: 24110625)
H Hussain, K Benkrid, and H. Seker, "Reconfiguration-Based Implementation of
SVM Classifier on FPGA for Classifying Microarray Data", Proc. of the IEEE
EMBC 2013, 3-7 July 2013, Osaka, Japan. (PMID: 24110373)
M.N. Kurnaz, and H. Seker,
"A Framework Towards Computational Discovery of Disease Sub-types and
Associated (Sub-) Biomarkers", Proc. of the IEEE EMBC 2013, 3-7 July 2013,
Osaka, Japan. (PMID: 24110627)
2012
H. Hussain, K. Benkrid, A. Ebrahim, A.T. Erdogan, and H. Seker, "Novel Dynamic Partial Reconfiguration
Implementation of K-means Clustering on FPGAs: Comparative Results with GPPs
and GPUs", International Journal of
Reconfigurable Computing, 2012 (Volume 2012 (2012), Article
ID 135926)
A. Orun
and H. Seker,
"Development of a computer game-based framework for cognitive behaviour
identification by using Bayesian inference methods", Computers in Human Behavior Journal, Vol.
28(4), pp: 1332 - 1341, July 2012.
M. Mueller-Holtz, H. Seker, J.
McKenna, M. Prausnitz, M. E. Marlow and G. Smith,
"Assessment of Microneedle Intradermal Penetration Depth Using Terahertz
Pulsed Imaging", UK PharmSci 2012 Conference,
12-14 Sept 2012, Nottingham, UK.
M.E. Marlow, H. Seker and
G. Smith, "Characterisation of amorphous and crystalline domains using
terahertz spectroscopy", UK PharmSci 2012
Conference, 12-14 Sept 2012, Nottingham, UK.
H. Hussain, K. Benkrid, C.Hong, and H. Seker,
"An adaptive FPGA implementation of multi-core K-nearest neighbour
ensemble classifier using dynamic partial reconfiguration", Proceedings -
22nd International Conference on Field Programmable Logic and Applications,
(FPL2012), Article number:6339251, pp:627-630, August 2012, Oslo, Norway
H. M.
Hussain, K.Benkrid and H.
Seker, "An Adaptive Implementation of a Dynamically Reconfigurable
K-Nearest Neighbour Classifier on FPGA", NASA/ESA Conference on Adaptive
Hardware and Systems (AHS-2012), June 25-28, 2012, Germany.
Z.C. Gormez,
O. Kursun, A. Sertbas and H. Seker,
"Statistical Bias and Variance of Gene Selection and Cross Validation
Methods: A Case Study on Hypertension Prediction", Proc. of IEEE BHI2012,
China, 5-7 January 2012.
L. Picinali,
C. Chrysostomou and H. Seker, "The Sound of
Proteins", Proc. of IEEE BHI2012, China, 5-7 January 2012.
A.B. Orun,
F. Kurugollu and H.
Seker, "Behaviour analysis of
micro-organisms to observe invisible substance effects: towards more sensitive
biological effect detectors", Proc. of IEEE BHI2012, China, 5-7 January
2012.
Y. Kocyigit
and H. Seker,
"Imbalanced Data Classifier By Using Ensemble
Fuzzy C- Means Clustering", Proc. Of IEEE BHI2012, China, 5-7 January
2012.
2011
H.M. Hussain, K. Benkrid, A.T. Erdogan and H. Seker, "Highly Parameterized K-means Clustering on FPGAs: Comparative Results with GPPs and GPUs", Proc. of the 2011 International Conference on ReConFigurable Computing and FPGAs, November 30 - December 2, 2011, Cancun, Mexico
C. Chrysostomou, H. Seker, N. Aydin, "Investigation into the effects of an individual amino acid on protein function by means of a Resonant Recognition Model", Lecture Notes in Computer Science, Vol. 6935, September 2011
L.A. Wall, M. Mueller-Holtz, I. Ermolina, M.J. Gamlen, H. Seker, G. Smith, "Evaluating lactose content within Avicel® PH-101 tablets by computational analysis of terahertz waveforms", UKPHARM, September 2011
C. Chrysostomou, H. Seker, N. Aydin, "Effects of windowing and zero-padding on Complex Resonant Recognition Model for protein sequence analysis", Proc. of EMBC 2011, Boston, USA, 30 August -3 September 2011 (PMID: 22255450)
H.M. Hussain, K. Benkrid, H. Seker, A.T. Erdogan, "FPGA Implementation of K-means Algorithm for Bioinformatics Application: An Accelerated Approach to Cluster Microarray Data", Proc. of 2011 NASA/ESA Conference on Adaptive Hardware and Systems (AHS-2011), pp: 248-255, June 6 – 9, 2011, San Diego, California, USA
H. Seker, (abstract for invited talk),
"Recent advances and challenges in the computational discovery of
biomarkers for genomics, proteomics and metabolomics", International Journal of Experimental and Clinical Pathophysiology
and Drug Research, pp: 500-501, Vol. 25 (3), May-June 2011 (supplement for the
4th Int. Conf. of Molecular Medicine, June 2011, Istanbul, Turkey)
H. Seker, "Computational Discovery of Personalised Biomarkers", Proc. of the International Congress on Bioinformatics and Biomics (18-22 May 2011), Kusadasi, Turkey.
2010
C. Chrysostomou, H. Seker, N. Aydin and P. I. Haris, "Complex Resonant Recognition Model in Analysing Influenza A Virus Subtype Protein Sequences", Proc. of IEEE ITAB 2010, Corfu, November 2010, pp:1-4.
M. Gorania, H. Seker and P.I. Haris, "Predicting a protein's melting temperature from its amino acid sequence", Proc. of IEEE EMBC, Sept. 2010, pp:1820-1823. (PMID: 21095941)
N. I. Nwankwo and H. Seker, "A signal processing-based bioinformatics approach to assessing drug resistance: Human Immunodeficiency Virus as a case study", Proc. of IEEE EMBC, Sept. 2010, pp: 1836-1839 (PMID: 21096145)
I. Ali and H. Seker, "A comparative study for characterisation and prediction of tissue-specific DNA methylation of CpG islands in chromosomes 6, 20 and 22", Proc. of IEEE EMBC, Sept. 2010, pp: 1832-1835. (PMID: 21096144)
H. Kaya, O. Kursun and H. Seker, "Stacking Class Probabilities Obtained from View-Based Cluster Ensemble", Lecture Notes in Computer Science, June 2010, vol. 6113/2010, pp: 397-404.
N. Nwankwo and H. Seker, "Assessment of the binding characteristics of human Immunodeficiency virus Type 1 Glycoprotein120 and Host Cluster of Differentiation4 Using Digital Signal Processing", Proc. of The 10th IEEE International Conference on Bioinformatics and Bioengineering (BIBE-2010), May 31-June 3, Philadelphia, USA, 2010.
H. Seker, "Analysis of Protein Sequences by using Signal Processing Methods", (invited paper), Proc. of Workshop on Recent Advances in Applications of Bioinformatics and Biomics, July 12-14 2010, Çeşme, Turkey, pp: 35-47.
H. Seker, "Data Mining in Metabolomics", (invited paper), Metabolomics Summer School, 4 - 10 July 2010, Trabzon, Turkiye, pp: 271-291.
Pre-2010
publications
I. Ali and H. Seker, “Detailed methylation prediction of CpG islands on human chromosome 21”, Proc. of the 10th WSEAS International Conference on Mathematics & Computers in Biology & Chemistry, 2009.
C. Newby, Y. Yang and H. Seker, “Investigation into Effectiveness of Rough Sets in Prediction of Enzyme and Protein Structure Classes”, Proc. of IEEE IJCNN, 2009
C.O. Sakar, O. Kursun, H. Seker, F. Gurgen, N. Aydin, O.V. Favorov, “Parallel Interacting Multiview Learning: An Application to Prediction of Protein Sub-Nuclear Location”, Proc. of the 9th International Conference on Information Technology and Applications in Biomedicine (IEEE ITAB 2009), 2009
S. S. Nanuwa, A. Dziurla and H. Seker, “Weighted Amino Acid Composition based on Amino Acid Indices for Prediction of Protein Structural Classes”, Proc. of IEEE ITAB, 2009
H. Seker, “Novel weighted-amino acid composition for prediction of protein structural classes within the context of multi-sensor fusion approach”, Proc. of the 8th IEEE International Conference in Bioinformatics and Bioengineering, 2008
S. S. Nanuwa and H. Seker, “Investigation into the role of sequence-driven-features for prediction of protein structural classes”, Proc. of the 8th IEEE International Conference in Bioinformatics and Bioengineering, 2008
H. Seker, “Novel weighted-amino acid
composition for prediction of protein structural classes within the context of
multi-sensor fusion approach”, Proc. of the 8th
IEEE Int. Conf. in Bioinformatics and Bioengineering, Athens, October 2008.
H.Seker et al., “A bioinformatics approach to identification of
metalloproteins”, Proc. of the ISMB/ECCB 2007,
Vienna, July 2007.
H. Seker, “Multiple Clustering Models and SVD-QR-based
Method for Reliable Gene Expression Profile Analysis”, Proc. of the IPMU
2006, pp: 2821-26, Paris, July 2006.
H. Seker, R. Abdulla, and P. Harris, “Developing a
non-alignment based approach for identifying predictive features in metal
binding proteins”, Proc. of 2004 Congress Proteomics for Health, December 2004,
Bern, Switzerland.
H. Seker, R. Abdulla, and P. Harris, “Prediction of metal binding proteins based on secondary structure information using a fuzzy logic-based method”, Proc. of 2004 Congress Proteomics for Health, December 2004, Bern, Switzerland.
H. Seker, “A Multi-Fuzzy Filtering Approach to Reliable Gene Expression Profile Analysis”, Proc. of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, October 2004, San Diego, CA, USA, pp: 37-40.
M. Frize, D. Ibrahim, H. Seker, et al. “Predicting Clinical Outcomes for Newborns using Two Artificial Intelligence Approaches”, Proc. of the 26th Annual IEEE EMBS 2004 Conference, San Francisco, CA, USA, Sept. 2004, pp:3202-3205. (PMID: 17270961)
H. Seker et al., “Analysis of cellular and molecular markers by statistical,
artificial neural networks and fuzzy logic-based approaches as an aid in
intelligent prognostic decision making in oncology”, Recent Research Developments in
Cellular Biochemistry, Chapter 4, Transworld Research Network, pp: 79-97, 2004.
H. Seker, M.O. Odetayo, D. Petrovic and R.N.
Naguib, “A fuzzy logic based method for prognostic decision making in breast
and prostate cancers”, IEEE Transactions
on Information Technology in Biomedicine, Vol. 7(2), pp: 114-122, June
2003. (PMID: 12834167)
H. Seker, M.O. Odetayo, D. Petrovic, R.N.G. Naguib, and F. Hamdy, “An Intelligent Hybrid Neuro-Fuzzy Rule-Based System for Prognostic Decision Making in Prostate Cancer Patients”, Proc. of the 4th Annual IEEE Engineering in Medicine and Biology Society Special Topic Conference on Information Technology Applications in Biomedicine, April 2003, Birmingham, UK.
H. Seker, M. Odetayo, D. Petrovic, R.N.G. Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V. Sherbet, “A Neuro-Fuzzy Rule-Based Intelligent Survival Analysis of Breast Cancer Patients using Histological and Image Cytometric Prognostic Factors”, Proc. of the 94th Annual Meeting of American Association for Cancer Research, April 2003, Toronto, Canada.
H. Seker, M. Odetayo, D. Petrovic, R.N.G. Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V. Sherbet, “Assessment of Nodal Involvement in Breast Cancer Patients Using Histological and Image Cytometric Prognostic Factors”, Proc. of the 93rd Annual Meeting of American Association for Cancer Research, San Francisco, CA, USA, April 2002 (Abstract).
C.J. James, H. Arochena, A. Boardman and H. Seker, Editors, Proceedings of the IEEE EMBSS UK & RoI Postgraduate Conference in Biomedical Engineering and Medical Physics, Birmingham, UK, 2002 (ISBN: 0-9543157-0-7)
H. Seker, M. Odetayo, D. Petrovic, R.N.G. Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V. Sherbet, “A Hybrid System for Nodal Involvement Assessment in Breast Cancer Patients”, Proc. of the 2nd Joint Meeting of IEEE EMBS-BMES, October 2002, Houston, TX, USA.
H. Seker, M.O. Odetayo, D. Petrovic, and R. Naguib, “Prognostic Decision Making in Prostate and Breast Cancers: Comparison of Statistical, Neural Networks and Fuzzy Approaches”, Proc. of The 6th World Multiconference on Systemics, Cybernetics and Informatics (SCI 2002), Orlando, USA, July 2002.
H. Seker, M. Odetayo, D. Petrovic, R.N.G. Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V. Sherbet, “An Artificial Neural Network Based Feature Evaluation Index for the Assessment of Clinical Factors in Breast Cancer Survival Analysis”, Proc. of IEEE Canadian Conference on Electrical and Computer Engineering, Manitoba, Canada, May 2002.
H. Seker, M. Odetayo, D. Petrovic, R.N.G. Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V. Sherbet, “Soft Feature Evaluation Indices for the Identification of Significant Image Cytometric Factors in Assessment of Nodal Involvement in Breast Cancer Patients”, Proc. of IEEE 2002 International Conference on Fuzzy Systems, Honolulu, USA, May 2002, vol.2, pp: 1592 – 1595.
H. Seker, M.O. Odetayo, D. Petrovic, R.N.G. Naguib, and F. Hamdy, “A hybrid system for prognosis in prostate cancer”, Proc. of the IEEE EMBSS UK & RoI Postgraduate Conference in Biomedical Engineering and Medical Physics, Birmingham, July 2002, pp: 18.
H. Seker, M.O. Odetayo, D. Petrovic, R.N.
Naguib, C. Bartoli, L. Alasio, M.S. Lakshmi and G.V.
Sherbet, “Assessment of nodal involvement and survival analysis in breast
cancer patients using image cytometric data: statistical, neural network and
fuzzy approaches”, Anticancer Research
(International Journal of Cancer Research and Treatment), Vol.22(1), pp:
433-438, Jan-Feb. 2002. (PMID: 12017328)
H. Seker et al., “Prognostic Comparison of
Statistical, Neural and Fuzzy Methods of Analysis of Breast Cancer Image
Cytometric Data”, (Award Winning
Paper from IEEE Engineering in Medicine and Biology Society) The 23rd
Annual International Conference of the IEEE Engineering in Medicine and Biology
Society, October 2001.
H. Seker, D.H. Evans, N. Aydin, E. Yazgan, and R.N.G. Naguib, “Intelligent Detection of Abnormal Neonatal Cerebral Heamodynamics in A Neonatal Intensive Care Environment”, Proc. of the 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, October 2001, Istanbul, Turkey.
H. Seker, M.O. Odetayo, D. Petrovic, R. Naguib, and F. Hamdy, “Statistical and Soft Feature Evaluation Indices for Prostate Cancer Prognostic Factor Assessments”, Proc. of EUSFLAT 2001-An International Conference in Fuzzy Logic and Technology, 2001, Leicester, UK, pp: 26-29.
H. Seker, D.H.
Evans, N. Aydin and E. Yazgan, “Compensatory fuzzy neural networks based intelligent
detection of abnormal neonatal cerebral Doppler ultrasound waveforms”, IEEE Transactions on Information Technology
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